Spectral splitting of a stimulated Raman transition in a single molecule
Johannes Zirkelbach,
Burak Gürlek,
Masoud Mirzaei,
Alexey Shkarin,
Tobias Utikal,
Stephan Götzinger,
Vahid Sandoghdar
Physical Review Research
5
043244
(2023)
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The small cross-section of Raman scattering poses a great challenge for its direct study at the single-molecule level. By exploiting the high Franck-Condon factor of a common-mode resonance, choosing a large vibrational frequency difference in electronic ground and excited states and operating at T<2K, we succeed at driving a coherent stimulated Raman transition in individual molecules. We observe and model a spectral splitting that serves as a characteristic signature of the phenomenon at hand. Our study sets the ground for exploiting the intrinsic optomechanical degrees of freedom of molecules for applications in solid-state quantum optics and information processing.
On-chip interference of scattering from two individual molecules
Dominik Rattenbacher,
Alexey Shkarin,
Jan Renger,
Tobias Utikal,
Stephan Götzinger,
Vahid Sandoghdar
Integrated photonic circuits offer a promising route for studying coherent cooperative effects of a controlled collection of quantum emitters. However, spectral inhomogeneities, decoherence, and material incompatibilities in the solid state make this a nontrivial task. Here, we demonstrate efficient coupling of a pair of Fourier-limited organic molecules embedded in a polyethylene film to a TiO2 microdisc resonator on a glass chip. Moreover, we tune the resonance frequencies of the emitters with respect to that of the microresonator by employing nanofabricated electrodes. For two molecules separated by a distance of about 8 µm and an optical phase difference of about pi/2, we report on a large collective extinction of the incident light in the forward direction and the destructive interference of its scattering in the backward direction. Our work sets the ground for coherent coupling of several quantum emitters via a common mode and realization of polymer-based hybrid quantum photonic circuits.
Insights into protein structure using cryogenic light microscopy
Hisham Mazal,
Franz Wieser,
Vahid Sandoghdar
Biochemical Society Transactions
(2023)
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Fluorescence microscopy has witnessed many clever innovations in the last two decades, leading to new methods such as structured illumination and super-resolution microscopies. The attainable resolution in biological samples is, however, ultimately limited by residual motion within the sample or in the microscope setup. Thus, such experiments are typically performed on chemically fixed samples. Cryogenic light microscopy (Cryo-LM) has been investigated as an alternative, drawing on various preservation techniques developed for cryogenic electron microscopy (Cryo-EM). Moreover, this approach offers a powerful platform for correlative microscopy. Another key advantage of Cryo-LM is the strong reduction in photobleaching at low temperatures, facilitating the collection of orders of magnitude more photons from a single fluorophore. This results in much higher localization precision, leading to Angstrom resolution. In this review, we discuss the general development and progress of Cryo-LM with an emphasis on its application in harnessing structural information on proteins and protein complexes.
Label-free discrimination of extracellular vesicles from large lipoproteins
Anna D. Kashkanova,
Martin Blessing,
Marie Reischke,
Jan-Ole Baur,
Andreas S. Baur,
Vahid Sandoghdar,
Jan Van Deun
Journal of extracellular vesicles
12
12348
(2023)
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Extracellular vesicles (EVs) are increasingly gaining interest as biomarkers and therapeutics. Accurate sizing and quantification of EVs remain problematic, given their nanometre size range and small scattering cross-sections. This is compounded by the fact that common EV isolation methods result in co-isolation of particles with comparable features. Especially in blood plasma, similarly-sized lipoproteins outnumber EVs to a great extent. Recently, interferometric nanoparticle tracking analysis (iNTA) was introduced as a particle analysis method that enables determining the size and refractive index of nanoparticles with high sensitivity and precision. In this work, we apply iNTA to differentiate between EVs and lipoproteins, and compare its performance to conventional nanoparticle tracking analysis (NTA). We show that iNTA can accurately quantify EVs in artificial EV-lipoprotein mixtures and in plasma-derived EV samples of varying complexity. Conventional NTA could not report on EV numbers, as it was not able to distinguish EVs from lipoproteins. iNTA has the potential to become a new standard for label-free EV characterization in suspension.
Organic Molecules as Origin of Visible-Range Single Photon Emission from Hexagonal Boron Nitride and Mica
Michael Neumann,
Xu Wei,
Luis Morales-Inostroza,
Seunghyun Song,
Sung-Gyu Lee,
Kenji Watanabe,
Takashi Taniguchi,
Stephan Götzinger,
Young Hee Lee
The discovery of room-temperature single-photon emitters (SPEs) hosted by two-dimensional hexagonal boron nitride (2D hBN) has sparked intense research interest. Although emitters in the vicinity of 2 eV have been studied extensively, their microscopic identity has remained elusive. The discussion of this class of SPEs has centered on point defects in the hBN crystal lattice, but none of the candidate defect structures have been able to capture the great heterogeneity in emitter properties that is observed experimentally. Employing a widely used sample preparation protocol but disentangling several confounding factors, we demonstrate conclusively that heterogeneous single-photon emission at ∼2 eV associated with hBN originates from organic molecules, presumably aromatic fluorophores. The appearance of those SPEs depends critically on the presence of organic processing residues during sample preparation, and emitters formed during heat treatment are not located within the hBN crystal as previously thought, but at the hBN/substrate interface. We further demonstrate that the same class of SPEs can be observed in a different 2D insulator, fluorophlogopite mica.
Quantum Efficiency of Single Dibenzoterrylene Molecules in p-Dichlorobenzene at Cryogenic Temperatures
Mohammad Musavinezhad,
Alexey Shkarin,
Dominik Rattenbacher,
Jan Renger,
Tobias Utikal,
Stephan Götzinger,
Vahid Sandoghdar
The Journal of Physical Chemistry B
5353-5359
(2023)
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We measure the quantum efficiency (QE) of individual dibenzoterrylene (DBT) molecules embedded in p-dichlorobenzene at cryogenic temperatures. To achieve this, we combine two distinct methods based on the maximal photon emission and on the power required to saturate the zero-phonon line to compensate for uncertainties in some key system parameters. We find that the outcomes of the two approaches are in good agreement for reasonable values of the parameters involved, reporting a large fraction of molecules with QE values above 50%, with some exceeding 70%. Furthermore, we observe no correlation between the observed lower bound on the QE and the lifetime of the molecule, suggesting that most of the molecules have a QE exceeding the established lower bound. This confirms the suitability of DBT for quantum optics experiments. In light of previous reports of low QE values at ambient conditions, our results hint at the possibility of a strong temperature dependence of the QE.
Confocal Interferometric Scattering Microscopy Reveals 3D Nanoscopic Structure and Dynamics in Live Cells
Michelle Küppers,
David Albrecht,
Anna D. Kashkanova,
Jennifer Lühr,
Vahid Sandoghdar
Nature Communications
14
1962
(2023)
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Bright-field light microscopy and related techniques continue to play a key role in life sciences because they provide a facile and label-free insight into biological specimen. However, lack of three-dimensional imaging and low sensitivity to nanoscopic features hamper their application in high-end quantitative studies. Here, we remedy these shortcomings by employing confocal interferometric scattering (iSCAT) microscopy. We demonstrate the performance of this label-free technique in a selection of case studies in live cells and benchmark our findings against simultaneously acquired fluorescence images. We reveal the nanometric topography of the nuclear envelope, quantify the dynamics of the endoplasmic reticulum, detect single microtubules, and map nanoscopic diffusion of clathrin-coated pits undergoing endocytosis. Furthermore, we introduce the combination of confocal and wide-field iSCAT modalities for simultaneous imaging of cellular structures and high-speed tracking of nanoscopic entities such as single SARS-CoV2 virions. Confocal iSCAT can be readily implemented as an additional contrast mechanism in existing laser scanning microscopes.
Self-supervised machine learning pushes the sensitivity limit in label-free detection of single proteins below 10 kDa
Mahyar Dahmardeh,
Houman Mirzaalian Dastjerdi,
Hisham Mazal,
Harald Köstler,
Vahid Sandoghdar
Interferometric scattering (iSCAT) microscopy is a label-free optical method capable of detecting single proteins, localizing their binding positions with nanometer precision, and measuring their mass. In the ideal case, iSCAT is limited by shot noise such that collection of more photons should extend its detection sensitivity to biomolecules of arbitrarily low mass. However, a number of technical noise sources combined with speckle-like background fluctuations have restricted the detection limit in iSCAT. Here, we show that an unsupervised machine learning isolation forest algorithm for anomaly detection pushes the mass sensitivity limit by a factor of 4 to below 10 kDa. We implement this scheme both with a user-defined feature matrix and a self-supervised FastDVDNet and validate our results with correlative fluorescence images recorded in total internal reflection mode. Our work opens the door to optical investigations of small traces of biomolecules and disease markers such as α-synuclein, chemokines and cytokines.<br><br>
Contact
Nano-Optics Division Prof. Vahid Sandoghdar
Max Planck Institute for the Science of Light Staudtstr. 2 91058 Erlangen, Germany
