Publications


 

An overview of publications is also available here.

2009

Stability of a Surface-Bound Oligonucleotide Duplex Inferred from Molecular Dynamics: A Study of Single Nucleotide Defects Using DNA Microarrays

Thomas Naiser, Jona Kayser, Timo Mai, Wolfgang Michel, Albrecht Ott

PHYSICAL REVIEW LETTERS 102 (21) 218301 (2009) | Journal

Microarray technology uses the sequence dependent hybridization<br> (binding) affinity of surface-bound oligonucleotide strands for the<br> quantification of complex nucleic acid mixtures. In spite of its huge<br> potential in life science and medicine, microarray oligonucleotide<br> hybridization remains far from being understood. Taking advantage of<br> microarray combinatorial possibilities we show that, although surface<br> bound, the hybridization affinities of single-base mismatched<br> oligonucleotides can be derived from first principles using parameters<br> from bulk.

Contact

Research Group Jona Kayser

Max Planck Institute for the Science of Light
Staudtstr. 2
91058 Erlangen, Germany

jona.kayser@mpl.mpg.de

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